Molecular biology explores the tiny machinery inside living cells, revealing how genetic instructions are read, copied, and turned into the proteins that keep us alive. This field acts as a bridge between the static code of DNA and the dynamic processes that drive growth, disease, and life itself, offering insights into everything from cellular repair to the development of new medicines.

On Gist.Science, we track every new preprint uploaded to bioRxiv in this category to make these complex discoveries accessible to everyone. Our team processes each submission to provide both clear, plain-language explanations and detailed technical summaries, ensuring you can grasp the core findings without getting lost in dense academic jargon.

Below are the latest molecular biology papers freshly processed from bioRxiv, ready for you to explore and understand.

📄 molecular biology

Antimicrobial-resistance plasmids encode Evangelion, a widespread DUF4062 anti-phage defence family

This study identifies Evangelion, a widespread family of DUF4062-based anti-phage defence systems enriched on antimicrobial-resistance plasmids that function by sensing phage replication to trigger NAD depletion and abortive infection, thereby revealing a novel mobile defence mechanism discovered through phenotype-guided interrogation.

Ibarra-Chavez, R., Azam, A. H., Chihara, K., Miranda Djurhuus, A., Gottlieb, K. A., Tamura, A., Sicheritz-Ponten, T., Ma (…)2026-07-09
📄 molecular biology

Host species background, defence systems, and phage tail gene architecture shape phage infectivity in cystic fibrosis-associated Achromobacter

This study demonstrates that bacterial strain identity, rather than specific defense systems or phage tail genes, is the primary driver of phage infectivity in cystic fibrosis-associated *Achromobacter*, highlighting the critical need for quantitative phenotyping of individual phage-host pairs to guide rational therapy design.

Tarasenko, A., Papudeshi, B., Nyugen, V., Grigson, S. R., Bouras, G., Mallawaarachchi, V., Hutton, A. L. K., Green, R. (…)2026-07-09
📄 molecular biology

Environment-dependent landscapes of coding variant impacts on coproporphyrinogen oxidase

This study systematically maps the functional impacts of nearly all possible CPOX amino acid substitutions under both normal and mercury-exposed conditions to resolve the classification of uncertain variants, reveal environment-dependent pathogenicity, and provide a comprehensive resource for understanding Hereditary Coproporphyria.

van Loggerenberg, W., Zhang, H., Senguttuvan, V., Chambers, M. J., Panchalingam, M., Rasoulzadeh, A., Axakova, A., Gebbi (…)2026-07-09
📄 molecular biology

The projection basis determines the information ceiling for perturbation prediction

The paper demonstrates that the predictive performance of deep-learning models for perturbation responses is fundamentally limited by the information captured in the projection basis, revealing that while PCA effectively models chemical perturbations by capturing high-variance modes, network-based bases are superior for genetic perturbations, and graph wavelets can unify both by accessing the full graph spectrum.

BIANCO, S.2026-07-09
📄 molecular biology

Regulation of protein abundance in neurons by selective translation of 3'UTR isoforms

This study reveals an evolutionarily conserved negative feedback loop in neurons where the ELAV protein promotes the production of long 3'UTR mRNA isoforms that are subsequently translationally repressed by Pumilio, a mechanism essential for maintaining proteostasis, ensuring developmental viability, and conferring stress resilience.

Gorey, S., Ozbulut, H. C., Carrasco, J., Zhang, Y., Hess, A., Akol, I., Alfonso-Gonzalez, C., Shi, M., Grzejda, D., Wolt (…)2026-07-09
📄 molecular biology

Sex-Dependent Epigenomic and Transcriptomic Reprogramming Links Maternal Obesity to Cardiac Remodeling in Adult Offspring

This study demonstrates that maternal obesity induces persistent, sex-dependent epigenetic and transcriptomic reprogramming in the offspring heart, leading to severe pathological cardiac remodeling in males but adaptive responses in females.

Wilson, T. D., Philips, E. A., Alharithi, Y. J., Broberg, C., Vanderpool, J., Rakshe, S., Fei, S. S., Davis, B. A., Koch (…)2026-07-08
📄 molecular biology

SELECT-seq allows Pre-Sequencing Enrichment of SNP Edits in One-Pot Single-Cell Whole-Transcriptome Sequencing

The paper introduces SELECT-seq, a rapid, one-pot single-cell workflow that integrates SNP-specific enrichment with whole-transcriptome sequencing to efficiently establish causal genotype-phenotype relationships without laborious cloning steps.

Iwama, S., Gitterman, D., Brendler-Spaeth, T., Waters, A. J., Robertson, H., Strauss, M., Adams, D., Cooper, S. E., Wu (…)2026-07-08
📄 molecular biology

PQBP1 couples HIV-1 capsid recognition to cGAS recruitment through conformational remodeling

This study reveals that HIV-1 capsid binding induces long-range conformational remodeling in the intrinsically disordered protein PQBP1, shifting its structural ensemble to a state competent for recruiting cGAS and thereby linking viral capsid recognition to innate immune activation.

Allen, D. S., Manna, A., Beusch, C. M., Zhang, T.-h., Ganser-Pornillos, B. K., Piacentini, J., Oh, S., Prabhu, S., Mehta (…)2026-07-08